Annotation-Informed Block-Sparse Bayesian Modeling for cis-Expression Prediction

Genotype-based cis-expression prediction depends on accurately modeling local regulatory architecture. We present block-sparse Bayesian sparse linear mixed model (bsBSLMM), an extension of Bayesian sparse linear mixed model (BSLMM) that incorporates linkage disequilibrium (LD)-block spike-and-slab sparsity and a transcription start site (TSS)-informed SNP inclusion prior. Across 23,098 genes from GEUVADIS European-ancestry lymphoblastoid cell lines, bsBSLMM retained more predictable genes than BSLMM, LASSO, BLUP, TIGAR elastic net, and TIGAR Dirichlet-process regression under matched evaluation criteria. Compared with BSLMM, bsBSLMM improved held-out prediction performance for most shared genes, with gains driven primarily by LD-block sparsity and further enhanced by the TSS-informed prior. Variants selected by bsBSLMM showed stronger enrichment in GM12878 DNase and H3K27ac regulatory regions than variants selected by BSLMM. In transcriptome-wide association study (TWAS) analysis, bsBSLMM recovered established inflammatory bowel disease signals, including IL23R, and identified additional genome-wide significant genes not detected by BSLMM. Independent validation in the Louisiana Osteoporosis Study reproduced the increased prediction yield across ancestries and recovered biologically relevant bone mineral density pathways in downstream TWAS and gene set enrichment analyses. These results demonstrate that incorporating LD-block structure and biologically informed SNP priors improves cis-expression prediction and enhances downstream TWAS discovery.

EMA-Nesterov: Stabilizing Nesterov's Lookahead for Accelerated Deep Learning Optimization

Lookahead-based acceleration methods, such as Nesterov's momentum, are widely used in optimization, but they often become unreliable in deep learning training mainly due to stochastic gradient noise and non-convex loss landscapes. In particular, standard lookahead relies on short-horizon update signals (e.g., differences between consecutive iterates), which are inherently noisy and can lead to unstable extrapolation directions. This work revisits Nesterov's acceleration from a trajectory perspective and argues that effective acceleration in deep learning should harness the low-frequency trends of optimization trajectories rather than extrapolating noisy one-step updates. Leveraging this insight, we propose EMA-Nesterov, a simple modification that replaces the standard Nesterov's lookahead direction with an exponential moving average (EMA) of parameter updates. This yields a stabilized lookahead direction that captures and harnesses the evolving trend of the training trajectory through a low-pass filter, while remaining adaptive to progressive changes via the geometric weighting structure of EMA. We show that EMA-Nesterov retains a theoretical accelerated convergence rate in convex problems that is analogous to Nesterov's accelerated gradient method. Furthermore, we provide empirical evidence on language model pre-training to verify that EMA-Nesterov is broadly applicable across a range of fine-tuned base optimizers, including Adam, SOAP, Muon, as well as complex optimizers that achieve state-of-the-art performance on optimization benchmarks (NanoGPT). Compared to prior lookahead methods, EMA-Nesterov achieves better performance by avoiding the instability of short-horizon lookahead and the non-adaptivity of long-horizon lookahead.

To See is Not to Learn: Protecting Multimodal Data from Unauthorized Fine-Tuning of Large Vision-Language Model

The rapid advancement of Large Vision-Language Models (LVLMs) is increasingly accompanied by unauthorized scraping and training on multimodal web data, posing severe copyright and privacy risks to data owners. Existing countermeasures, such as machine unlearning and watermarks, are inherent post-hoc approaches that act only after intellectual property infringement has already occurred. In this work, we propose MMGuard to empower data owners to proactively protect their multimodal data against unauthorized LVLM fine-tuning. MMGuard generates unlearnable examples by injecting human-imperceptible perturbations that actively exploit the learning dynamics of LVLMs. By minimizing the training loss, the perturbation creates an optimization shortcut, causing the model to overfit to the noise and thereby degrading downstream performance when the perturbation is absent during inference. To further strengthen this defense, MMGuard introduces a cross-modal binding disruption, strategically shifting LVLM attention to enforce a spurious correlation between the noise and the training target with theoretical guarantees. Enhanced by an ensemble learning strategy for cross-model transferability, MMGuard is evaluated against nine open-source LVLMs across six datasets. Our comprehensive results demonstrate effective, stealthy, and robust protection under white-box, gray-box, and black-box threat models, establishing a mechanistic advantage in proactively defending against aggressive fine-tuning exploitation.

Cornerstones or Stumbling Blocks? Deciphering the Rock Tokens in On-Policy Distillation

While recent work in Reinforcement Learning with Verifiable Rewards (RLVR) has shown that a small subset of critical tokens disproportionately drives reasoning gains, an analogous token-level understanding of On-Policy Distillation (OPD) remains largely unexplored. In this work, we investigate high-loss tokens, a token type that--as the most direct signal of student-teacher mismatch under OPD's per-token KL objective--should progressively diminish as training converges according to existing studies; however, our empirical analysis shows otherwise. Even after OPD training reaches apparent saturation, a substantial subset of tokens continues to exhibit persistently high loss; these tokens, which we term Rock Tokens, can account for up to 18\% of the tokens in generated outputs. Our investigation reveals two startling paradoxes. First, despite their high occurrence frequency providing a disproportionately large share of total gradient norms, Rock Tokens themselves remain stagnant throughout training, resisting teacher-driven corrections. Second, through causal intervention, we find that these tokens provide negligible functional contribution to the model's actual reasoning performance. These findings suggest that a vast amount of optimization bandwidth is spent on structural and discourse residuals that the student model cannot or need not internalize. By deconstructing these dynamics, we demonstrate that strategically bypassing these ``stumbling blocks'' can significantly streamline the alignment process, challenging the necessity of uniform token weighting and offering a more efficient paradigm for large-scale model distillation.

Graph of Skills: Dependency-Aware Structural Retrieval for Massive Agent Skills

Skill usage has become a core component of modern agent systems and can substantially improve agents' ability to complete complex tasks. In real-world settings, where agents must monitor and interact with numerous personal applications, web browsers, and other environment interfaces, skill libraries can scale to thousands of reusable skills. Scaling to larger skill sets introduces two key challenges. First, loading the full skill set saturates the context window, driving up token costs, hallucination, and latency. In this paper, we present Graph of Skills (GoS), an inference-time structural retrieval layer for large skill libraries. GoS constructs an executable skill graph offline from skill packages, then at inference time retrieves a bounded, dependency-aware skill bundle through hybrid semantic-lexical seeding, reverse-weighted Personalized PageRank, and context-budgeted hydration. On SkillsBench and ALFWorld, GoS improves average reward by 43.6% over the vanilla full skill-loading baseline while reducing input tokens by 37.8%, and generalizes across three model families: Claude Sonnet, GPT-5.2 Codex, and MiniMax. Additional ablation studies across skill libraries ranging from 200 to 2,000 skills further demonstrate that GoS consistently outperforms both vanilla skills loading and simple vector retrieval in balancing reward, token efficiency, and runtime.

F2HDR: Two-Stage HDR Video Reconstruction via Flow Adapter and Physical Motion Modeling

Reconstructing High Dynamic Range (HDR) videos from sequences of alternating-exposure Low Dynamic Range (LDR) frames remains highly challenging, especially under dynamic scenes where cross-exposure inconsistencies and complex motion make inter-frame alignment difficult, leading to ghosting and detail loss. Existing methods often suffer from inaccurate alignment, suboptimal feature aggregation, and degraded reconstruction quality in motion-dominated regions. To address these challenges, we propose F2HDR, a two-stage HDR video reconstruction framework that robustly perceives inter-frame motion and restores fine details in complex dynamic scenarios. The proposed framework integrates a flow adapter that adapts generic optical flow for robust cross-exposure alignment, a physical motion modeling to identify salient motion regions, and a motion-aware refinement network that aggregates complementary information while removing ghosting and noise. Extensive experiments demonstrate that F2HDR achieves state-of-the-art performance on real-world HDR video benchmarks, producing ghost-free and high-fidelity results under large motion and exposure variations.

$\text{F}^2\text{HDR}$: Two-Stage HDR Video Reconstruction via Flow Adapter and Physical Motion Modeling

Reconstructing High Dynamic Range (HDR) videos from sequences of alternating-exposure Low Dynamic Range (LDR) frames remains highly challenging, especially under dynamic scenes where cross-exposure inconsistencies and complex motion make inter-frame alignment difficult, leading to ghosting and detail loss. Existing methods often suffer from inaccurate alignment, suboptimal feature aggregation, and degraded reconstruction quality in motion-dominated regions. To address these challenges, we propose $\text{F}^2\text{HDR}$, a two-stage HDR video reconstruction framework that robustly perceives inter-frame motion and restores fine details in complex dynamic scenarios. The proposed framework integrates a flow adapter that adapts generic optical flow for robust cross-exposure alignment, a physical motion modeling to identify salient motion regions, and a motion-aware refinement network that aggregates complementary information while removing ghosting and noise. Extensive experiments demonstrate that $\text{F}^2\text{HDR}$ achieves state-of-the-art performance on real-world HDR video benchmarks, producing ghost-free and high-fidelity results under large motion and exposure variations.

ToolPRMBench: Evaluating and Advancing Process Reward Models for Tool-using Agents

Reward-guided search methods have demonstrated strong potential in enhancing tool-using agents by effectively guiding sampling and exploration over complex action spaces. As a core design, those search methods utilize process reward models (PRMs) to provide step-level rewards, enabling more fine-grained monitoring. However, there is a lack of systematic and reliable evaluation benchmarks for PRMs in tool-using settings. In this paper, we introduce ToolPRMBench, a large-scale benchmark specifically designed to evaluate PRMs for tool-using agents. ToolPRMBench is built on top of several representative tool-using benchmarks and converts agent trajectories into step-level test cases. Each case contains the interaction history, a correct action, a plausible but incorrect alternative, and relevant tool metadata. We respectively utilize offline sampling to isolate local single-step errors and online sampling to capture realistic multi-step failures from full agent rollouts. A multi-LLM verification pipeline is proposed to reduce label noise and ensure data quality. We conduct extensive experiments across large language models, general PRMs, and tool-specialized PRMs on ToolPRMBench. The results reveal clear differences in PRM effectiveness and highlight the potential of specialized PRMs for tool-using. Code and data will be released at https://github.com/David-Li0406/ToolPRMBench.

Generative Models for Synthetic Data: Transforming Data Mining in the GenAI Era

Generative models such as Large Language Models, Diffusion Models, and generative adversarial networks have recently revolutionized the creation of synthetic data, offering scalable solutions to data scarcity, privacy, and annotation challenges in data mining. This tutorial introduces the foundations and latest advances in synthetic data generation, covers key methodologies and practical frameworks, and discusses evaluation strategies and applications. Attendees will gain actionable insights into leveraging generative synthetic data to enhance data mining research and practice. More information can be found on our website: https://syndata4dm.github.io/.

Are Today's LLMs Ready to Explain Well-Being Concepts?

Well-being encompasses mental, physical, and social dimensions essential to personal growth and informed life decisions. As individuals increasingly consult Large Language Models (LLMs) to understand well-being, a key challenge emerges: Can LLMs generate explanations that are not only accurate but also tailored to diverse audiences? High-quality explanations require both factual correctness and the ability to meet the expectations of users with varying expertise. In this work, we construct a large-scale dataset comprising 43,880 explanations of 2,194 well-being concepts, generated by ten diverse LLMs. We introduce a principle-guided LLM-as-a-judge evaluation framework, employing dual judges to assess explanation quality. Furthermore, we show that fine-tuning an open-source LLM using Supervised Fine-Tuning (SFT) and Direct Preference Optimization (DPO) can significantly enhance the quality of generated explanations. Our results reveal: (1) The proposed LLM judges align well with human evaluations; (2) explanation quality varies significantly across models, audiences, and categories; and (3) DPO- and SFT-finetuned models outperform their larger counterparts, demonstrating the effectiveness of preference-based learning for specialized explanation tasks.